PUMI
latest

Contents:

  • PUMI
    • PUMI package
    • pipelines package
    • examples package
    • tests package
PUMI
  • PUMI
  • Edit on GitHub

PUMI

  • PUMI package
    • PUMI.interfaces package
      • PUMI.interfaces.HDBet module
    • PUMI.pipelines package
      • PUMI.pipelines.anat package
      • PUMI.pipelines.dwi package
      • PUMI.pipelines.func package
      • PUMI.pipelines.multimodal package
    • PUMI.plot package
      • PUMI.plot.carpet_plot module
    • PUMI.engine module
      • AnatPipeline
      • BidsApp
      • BidsPipeline
      • FuncPipeline
      • GroupPipeline
      • NestedMapNode
      • NestedNode
      • NestedWorkflow
      • PumiPipeline
      • QcPipeline
    • PUMI.utils module
      • TsExtractor()
      • above_threshold()
      • calc_friston_twenty_four()
      • calculate_FD_Jenkinson()
      • concatenate()
      • create_coregistration_qc()
      • create_segmentation_qc()
      • drop_first_line()
      • get_config()
      • get_indx()
      • get_ref_from_templateflow()
      • get_ref_locally()
      • get_reference()
      • max_from_txt()
      • mean_from_txt()
      • mist_labels()
      • mist_modules()
      • plot_carpet_ts()
      • plot_roi()
      • registration_ants_hardcoded()
      • relabel_atlas()
      • rpn_model()
      • scale_vol()
      • scrub_image()
  • pipelines package
    • Submodules
    • pipelines.rpn_signature module
  • examples package
    • examples.bet_bids_func_subworkflow module
    • examples.bet_bids_subworkflow module
    • examples.defacing_ex_bids module
    • examples.despiking_bids_ex module
    • examples.ex_bids_pipeline module
    • examples.ex_compcor module
    • examples.ex_func_proc module
    • examples.ex_func_to_anat_bids module
    • examples.ex_motion_correction module
    • examples.ex_tmpfilt module
    • examples.get_rpn_model module
    • examples.rpn_preproc module
    • examples.test module
  • tests package
    • tests.test_afni module
      • TestDespike
    • tests.test_ants module
      • TestAnts
    • tests.test_fsl module
Previous Next

© Copyright 2022, PUMI. Revision 2693d49f.

Built with Sphinx using a theme provided by Read the Docs.